# Continuous Time Meta-Analysis ('CoTiMA')

## Documentation for package ‘CoTiMA’ version 0.8.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

A B C D E M O P R S T V

## -- A --

A128 | A128 example matrix
A313 | A313 example matrix
ageM1 | ageM1 example vector
ageM128 | ageM128 example vector
ageM18 | ageM18 example vector
ageM201 | ageM201 example vector
ageM313 | ageM313 example vector
ageM32 | ageM32 example vector
ageM4 | ageM4 example vector
ageSD1 | ageSD1 example vector
ageSD128 | ageSD128 example vector
ageSD18 | ageSD18 example vector
ageSD201 | ageSD201 example vector
ageSD313 | ageSD313 example vector
ageSD32 | ageSD32 example vector
ageSD4 | ageSD4 example vector
alphas128 | alphas128 example vector
alphas313 | alphas313 example vector

## -- B --

burnout1 | burnout1 example vector
burnout128 | burnout128 example vector
burnout18 | burnout18 example vector
burnout201 | burnout201 example vector
burnout313 | burnout313 example vector
burnout32 | burnout32 example vector
burnout4 | burnout4 example vector

## -- C --

combineVariables128 | combineVariables128 example vector
combineVariablesNames128 | combineVariablesNames128 example vector
CoTiMABiG_D_BO | ctmaBiG-object reproducing results of Guthier et al. (2020)
CoTiMAFullFit_3 | ctmaFit-object with a 'full' CoTiMA of 3 studies
CoTiMAFullFit_6 | ctmaFit-object with a 'full' CoTiMA of 6 studies
CoTiMAFullFit_6_new | ctmaFit-object with a 'full' CoTiMA of 6 studies
CoTiMAFullInv23Fit_6 | 1st fitted ctmaFit-object in a series of 2 to test equality of 2 cross effects
CoTiMAFullInvEq23Fit_6 | 2nd fitted ctmaFit-object in a series of 2 to test equality of 2 cross effects
CoTiMAInitFit_3 | ctmaInit-object with of 3 primary studies
CoTiMAInitFit_6 | ctmaInit-object with 6 primary studies
CoTiMAInitFit_6_new | ctmaInit-object with 6 primary studies
CoTiMAInitFit_6_NUTS | ctmaInit-object with a 'full' CoTiMA of 6 studies using NUTS sampler
CoTiMAInitFit_D_BO | ctmaInit-object created by Guthier et al. (2020) with 48 primary studies
CoTiMAMod1onFullFit_6 | ctmaFit-object with a categorical moderator of the full drift matrix
CoTiMAMod1onFullFit_6_cats12 | ctmaFit-object with a categorical moderator of the full drift matrix
CoTiMAMod2on23Fit_6 | ctmaFit-object with a continuous moderator of 2 cross effects
CoTiMAPart134Inv3Fit_6 | ctmaFit-object with with only one cross effect and this one set equal across primary studies
CoTiMAPower_D_BO | ctmaPower-object reproducing results of Guthier et al. (2020)
CoTiMAStanctArgs | This are preset arguments
CoTiMAstudyList_3 | ctmaPrep-object created with 3 primary studies
CoTiMAstudyList_6 | ctmaPrep-object created with 6 primary studies
CoTiMAstudyList_6_new | ctmaPrep-object created with 6 primary studies
country1 | country1 example vector
country128 | country128 example vector
country18 | country18 example vector
country201 | country201 example vector
country313 | country313 example vector
country32 | country32 example vector
country4 | country4 example vector
ctmaAllInvFit | ctmaAllInvFit
ctmaBiG | ctmaBiG
ctmaBiGOMX | ctmaBiGOMX
ctmaCombPRaw | ctmaCombPRaw
ctmaCompFit | ctmaCompFit
ctmaCorRel | ctmaCorRel
ctmaEmpCov | ctmaEmpCov
ctmaEqual | ctmaEqual
ctmaFit | ctmaFit
ctmaFitList | ctmaFitList
ctmaFitToPrep | ctmaFitToPrep
ctmaGetPub | ctmaGetPub
ctmaInit | ctmaInit
ctmaLabels | ctmaLabels
ctmaLCS | ctmaLCS
ctmaOptimizeFit | ctmaOptimizeFit
ctmaOptimizeInit | ctmaOptimizeInit
ctmaPlot | ctmaPlot
ctmaPlotCtsemMod | ctmaPlotCtsemMod
ctmaPower | ctmaPower
ctmaPRaw | ctmaPRaw
ctmaPrep | ctmaPrep
ctmaPub | ctmaPub
ctmaRedHet | ctmaRedHet
ctmaSaveFile | ctmaSaveFile
ctmaScaleInits | ctmaScaleInits
ctmaShapeRawData | ctmaShapeRawData
ctmaStanResample | ctmaStanResample
ctmaStdParams | ctmaStdParams
ctmaSV | ctmaSV

## -- D --

delta_t1 | delta_t1 example vector
delta_t128 | delta_t128 example vector
delta_t18 | delta_t18 example vector
delta_t201 | delta_t201 example vector
delta_t228 | delta_t228 example vector
delta_t313 | delta_t313 example vector
delta_t32 | delta_t32 example vector
delta_t4 | delta_t4 example vector
demands1 | demands1 example vector
demands128 | demands128 example vector
demands18 | demands18 example vector
demands201 | demands201 example vector
demands313 | demands313 example vector
demands32 | demands32 example vector
demands4 | demands4 example vector
dl_link | dl_link example path

## -- E --

empcov1 | empcov1 example matrix
empcov128 | empcov128 example matrix
empcov18 | empcov18 example matrix
empcov201 | empcov201 example matrix
empcov313 | empcov313 example matrix
empcov32 | empcov32 example matrix
empcov4 | empcov4 example matrix

## -- M --

malePercent1 | malePercent1 example vector
malePercent128 | malePercent128 example vector
malePercent18 | malePercent18 example vector
malePercent201 | malePercent201 example vector
malePercent313 | malePercent313 example vector
malePercent32 | malePercent32 example vector
malePercent4 | malePercent4 example vector
moderator1 | moderator1 example vector
moderator128 | moderator128 example vector
moderator18 | moderator18 example vector
moderator201 | moderator201 example vector
moderator313 | moderator313 example vector
moderator32 | moderator32 example vector
moderator4 | moderator4 example vector
moderatorLabels | moderatorLabels example vector
moderatorValues | moderatorValues example vector

## -- O --

occupation1 | occupation1 example vector
occupation128 | occupation128 example vector
occupation18 | occupation18 example vector
occupation201 | occupation201 example vector
occupation313 | occupation313 example vector
occupation32 | occupation32 example vector
occupation4 | occupation4 example vector

## -- P --

pairwiseN128 | pairwiseN128 example vector
plot.CoTiMAFit | plot.CoTiMAFit
pubList_8 | pubList_8 example list

## -- R --

rawData228 | rawData228 example list
recodeVariables128 | recodeVariables128 example vector
results128 | results128 example list

## -- S --

sampleSize1 | sampleSize1 example vector
sampleSize128 | sampleSize128 example vector
sampleSize18 | sampleSize18 example vector
sampleSize201 | sampleSize201 example vector
sampleSize313 | sampleSize313 example vector
sampleSize32 | sampleSize32 example vector
sampleSize4 | sampleSize4 example vector
source1 | source1 example vector
source128 | source128 example vector
source18 | source18 example vector
source201 | source201 example vector
source313 | source313 example vector
source4 | source4 example vector
summary.CoTiMAFit | summary.CoTiMAFit

## -- T --

targetVariables1 | targetVariables1 example vector
targetVariables128 | targetVariables128 example vector
targetVariables313 | targetVariables313 example vector
targetVariables4 | targetVariables4 example vector

## -- V --

variableNames128 | variableNames128 example vector
variableNames18 | variableNames18 example vector
variableNames201 | variableNames201 example vector
variableNames32 | variableNames32 example vector