Package: RPANDA
Version: 2.5
Date: 2025-09-11
Type: Package
Title: Phylogenetic ANalyses of DiversificAtion
Depends: R (>= 3.5.0), ape, picante, methods,
Suggests: testthat
Imports: BB, bipartite, cluster, coda, deSolve, fields, fpc, geiger,
        glassoFast, graphics, grDevices, igraph, Matrix, mvtnorm,
        mvMORPH (>= 1.1.6), GUniFrac, parallel, ParallelLogger,
        phangorn, phytools, pracma, pspline, pvclust, raster,
        RColorBrewer, R.utils, Rmpfr, stats, TESS, utils, vegan
Encoding: UTF-8
Author: Hélène Morlon [aut, cre, cph],
  Eric Lewitus [aut, cph],
  Fabien Condamine [aut, cph],
  Marc Manceau [aut, cph],
  Julien Clavel [aut, cph],
  Jonathan Drury [aut, cph],
  Olivier Billaud [aut, cph],
  Odile Maliet [aut, cph],
  Leandro Aristide [aut, cph],
  Benoit Perez-Lamarque [aut, cph],
  Nathan Mazet [aut, cph]
Authors@R: c(person("Hélène", "Morlon", role = c("aut", "cre", "cph"), email = "helene.morlon@bio.ens.psl.eu"),
	person("Eric", "Lewitus", role = c("aut", "cph")),
	person("Fabien", "Condamine", role = c("aut", "cph")),
	person("Marc", "Manceau", role = c("aut", "cph")),
	person("Julien", "Clavel", role = c("aut", "cph")),
	person("Jonathan", "Drury", role = c("aut", "cph")),
  	person("Olivier", "Billaud", role = c("aut", "cph")),
	person("Odile", "Maliet", role = c("aut", "cph")),
	person("Leandro", "Aristide", role = c("aut", "cph")),
	person("Benoit", "Perez-Lamarque", role = c("aut", "cph")),
	person("Nathan", "Mazet", role = c("aut", "cph")))
Maintainer: Hélène Morlon <helene.morlon@bio.ens.psl.eu>
Description: Implements macroevolutionary analyses on phylogenetic trees. See
    Morlon et al. (2010) <DOI:10.1371/journal.pbio.1000493>, Morlon et al. (2011)
    <DOI:10.1073/pnas.1102543108>, Condamine et al. (2013) <DOI:10.1111/ele.12062>,
    Morlon et al. (2014) <DOI:10.1111/ele.12251>, Manceau et al. (2015) <DOI:10.1111/ele.12415>,
    Lewitus & Morlon (2016) <DOI:10.1093/sysbio/syv116>, Drury et al. (2016) <DOI:10.1093/sysbio/syw020>,
    Manceau et al. (2016) <DOI:10.1093/sysbio/syw115>, Morlon et al. (2016) <DOI:10.1111/2041-210X.12526>, Clavel & Morlon (2017) <DOI:10.1073/pnas.1606868114>,
    Drury et al. (2017) <DOI:10.1093/sysbio/syx079>, Lewitus & Morlon (2017) <DOI:10.1093/sysbio/syx095>,
    Drury et al. (2018) <DOI:10.1371/journal.pbio.2003563>, Clavel et al. (2019) <DOI:10.1093/sysbio/syy045>, Maliet et al. (2019) <DOI:10.1038/s41559-019-0908-0>,
    Billaud et al. (2019) <DOI:10.1093/sysbio/syz057>, Lewitus et al. (2019) <DOI:10.1093/sysbio/syz061>,
    Aristide & Morlon (2019) <DOI:10.1111/ele.13385>, Maliet et al. (2020) <DOI:10.1111/ele.13592>, Drury et al. (2021) <DOI:10.1371/journal.pbio.3001270>,
    Perez-Lamarque & Morlon (2022) <DOI:10.1111/mec.16478>, Perez-Lamarque et al. (2022) <DOI:10.1101/2021.08.30.458192>, Mazet et al. (2023) <DOI:10.1111/2041-210X.14195>, Drury et al. (2024) <DOI:10.1016/j.cub.2023.12.055>.
License: GPL-2
URL: https://github.com/hmorlon/PANDA
Repository: CRAN
RoxygenNote: 7.2.3
NeedsCompilation: yes
Packaged: 2025-09-17 13:43:09 UTC; morlon
Date/Publication: 2025-09-24 10:50:07 UTC
Built: R 4.5.1; x86_64-w64-mingw32; 2025-10-06 03:07:04 UTC; windows
Archs: x64
