3a44f41c58ff98810607a0869409e1b2 *DESCRIPTION
1ebbd3e34237af26da5dc08a4e440464 *LICENSE
255164ea26be7123aca0c2a61728dc11 *NAMESPACE
25b42b50a5ad0a9934110595ff0eccda *NEWS.md
f41975141a18c747a24b85dbc680d7dc *R/Additive.R
6434e94467c51dfc83799fe71abc3629 *R/Administration.R
263b2a3a6a3b222a005fa893d2afaa71 *R/AdministrationConstraints.R
16bb150ec3b18c65b1682bc4b8a61efd *R/Arm.R
2ca78f9f75e6a197b7a9bee250dc63c2 *R/BayesianFim.R
6a03713777aa6a8a8e7c82ad55c88edc *R/CategoricalCovariate.R
6aedc6a1610ba83c03b38c9feb12b974 *R/CategoricalCovariateWithIOV.R
e0c0c428be13105ce66ecd21a268cdf2 *R/Combined1.R
6943b6434f415483b98040348fca0bf5 *R/Combined2.R
c20c7b3b75ffacfb8fb28084c97af08d *R/Constant.R
dfb8c1f59d26f3dafdfc3af1d26c8b71 *R/Covariate.R
fa8cd1e689ce6cab85613ffdce8738c8 *R/CovariateModelEquation.R
8dbecf77ca8e2c4911e29a55a71abd37 *R/CovariateTest.R
5f4570f938bd8fb841c72bc96bbb48aa *R/Design.R
92cce44f27e3f3b0aff346938b039b8f *R/Distribution.R
02d69a1c75d7b3849664657440475b1d *R/Evaluation.R
55bb84142b321df2ce70efb283646969 *R/Exponential.R
ae8f4ebf9072b12584e29d968c349b07 *R/FedorovWynnAlgorithm.R
ee70dead258e8df64caa24bbab6c6e6a *R/Fim.R
e27082e53ee93954aceee92da2a01f0d *R/IndividualFim.R
2348ef3916ff2765c4d6bcfe16f27142 *R/LibraryOfModels.R
5502019ca6c5e8e0432004f9615a678f *R/LibraryOfPDModels.R
39cd7b770aeedd9d8c9476e80e071a2f *R/LibraryOfPKModels.R
2fed1552ae1553736de3381f93f81855 *R/LogNormal.R
c57b447e1613b7970a0988ec83c7a8de *R/Model.R
e815e75bce2646cf3561cff09272ca44 *R/ModelAnalytic.R
7d58e2ff1fd538e409facd669f40840c *R/ModelAnalyticInfusion.R
7fd9eab730a9910c61875b63eae6cec0 *R/ModelAnalyticInfusionSteadyState.R
fba4d24eb9aa8563a870f97e17b56592 *R/ModelAnalyticSteadyState.R
11ed8526e6c8d72685a5c66572dbbe55 *R/ModelError.R
2542532bfaa41125523bcf7b677e62b7 *R/ModelInfusion.R
9ced9a36a73221a2e69328a3a6d87488 *R/ModelODE.R
ebf63a047ff469c099b81ac47458bc5e *R/ModelODEInfusion.R
10794331f8b5d13d96afe9136db7400e *R/ModelODEInfusionDoseInEquation.R
8fa844c0ddd06f7df7e0eb16943d1453 *R/ModelParameter.R
96cefbfc483f373fcd09113018d8acc6 *R/MultiplicativeAlgorithm.R
f07ae2f7f7502739bc489f0fc76f4c87 *R/Normal.R
3978d085640a37f434b0d879d89d3731 *R/Optimization.R
c0fcd5dc1251a45d4175573fd83c2142 *R/PFIM-package.R
4e33603713c5bfe16eec89496687b001 *R/PFIMProject.R
d28d633b981595136cd55c25acbcf01f *R/PGBOAlgorithm.R
216f2db6a4c829233aad5ca2d9e9f525 *R/PSOAlgorithm.R
e461560d90e66742c44bec2320505faf *R/PopulationFim.R
b1604b059e0b8d69c2138a2b4de771f9 *R/Proportional.R
477e517e2fa69ee54ed27902a79c38ad *R/RcppExports.R
47c320ccaf47c7bb643bcafd5e9f3212 *R/SamplingTimeConstraints.R
8a67bfe4336df49eb74426439bd33562 *R/SamplingTimes.R
5ced67fa764306deda2f442b38d88ea6 *R/SimplexAlgorithm.R
471a58f0af015c04beb3e296cd4362c4 *R/covariate-test-power.R
d350512330e3ea76a2797d34a546d120 *R/covariates-fim-indbayes.R
0bac37d847980e72188351ecec716b23 *R/covariates-fim.R
00c5818141a95b3ebb8157bd737f9595 *R/evaluation-accessors.R
3f0d9736c797c08d157bebc9a9caba1d *R/evaluation-plots.R
0dbb1ecb74ad333604f377c83e3da497 *R/evaluation-report-kable.R
05514a6826bbaaae134dd658fa757268 *R/evaluation-report.R
f8c286b948197abbc38d8bed5584490c *R/model-analytic-eval.R
39c8b0df6fa9b1ac0661c9092cfba8ae *R/model-covariates.R
ddfba5a838f0fb2c4def710b2b365188 *R/model-error-variance.R
6e3e463d7551d65d9b9c5c4a0ca64cf8 *R/model-gradient.R
60f61fdf8e9cff2bf022533a6536eb3a *R/model-library-remap.R
16c77a503677ea49b4e6c096b04e640b *R/model-ode-bolus-simulate.R
30bed6c313299768867642fec63d98bf *R/model-ode-bolus.R
c65efd83e4f442bed8f0d13d88d02804 *R/model-type-dispatch.R
a75846c422a3930cce42664bcdc0225c *R/model-variance.R
b6c930102e290c1af865f99acba2ab64 *R/pfim-arm-constraints.R
4cf8d535fb550062d31d076311d9089d *R/pfim-constraint-grid.R
ae566b8e5673e66a1aba86ff1a5a4e88 *R/pfim-constraints-helpers.R
a779315cf97a040ebd137d5a71c39bca *R/pfim-continuous-opt.R
38dbe403e2b0f558cbdeb7364d736e5b *R/pfim-errors.R
6df0b6a15c9e6ccabf8fbe91f1692fed *R/pfim-extensions.R
d4b8d2b5152a8b93672ae56d697bda74 *R/pfim-fim-cache.R
ecb9f615ea7f7ea51d3b6a1c05811df6 *R/pfim-fim-labels.R
fb988b617f8646deb7b82fe79a9b6e1e *R/pfim-fim-optimal-arms.R
8d20c911e503164c912566e30465f422 *R/pfim-fim-optimizer-wiring.R
76f322b24f8db5abdfa0b2add17c57bf *R/pfim-fim-report-render.R
d0550e63ccdb905807e6715611e54790 *R/pfim-flat-sampling-layout.R
a609212fee077b77233e39e38ff9f85e *R/pfim-gradient-perf.R
b92986801cb4ce84f2116f1b03bfdd8d *R/pfim-linear-algebra.R
f3f805af51cd9cb829d041ce474f0938 *R/pfim-model-registry.R
b85a7e737cab2ab034c1fcd50d77ee1c *R/pfim-multi-design-opt.R
68eb9c0ed03f0c08346e6fb6c44a0d00 *R/pfim-plot-perf.R
6dd2a2072b36504feeb8e97acf0c8321 *R/pfim-project-access.R
c4fc6fb646be272c92f862c02075ac89 *R/pfim-rd-examples.R
39ea5263e20ab66fd460231129d9259b *R/pfim-registry.R
8ea4c621b59c9e50d97b6dcd7aa13e16 *R/pfim-session.R
282ef11d6fb98fb7089f8d7f5a2345f4 *R/pfim-subject-fim.R
2e3c8a20bf1a7ae5c508e2efe824336b *R/pfim-utils.R
7130b6ad32f8e8ce813fa7f4ab3f4253 *R/population-fim-variance.R
5bdbd871c9ac597240a060d6f2781a43 *R/s7-reexports.R
fbdc64534ff3445212ce9cba5324a0a8 *R/zzz.R
6c1fa71d3e06eb390ac5c2c6a1f2bfe5 *build/vignette.rds
51dad3d68450f8afc16d343539916dbf *inst/CITATION
91c4dcf7fde8d26c2d4fa97a8986a5c7 *inst/doc/Example01.R
9ee14a42790ec923af475df35340f447 *inst/doc/Example01.Rmd
1efb3e8f55ce6cf362135bd39aae0650 *inst/doc/Example01.html
bb514520915b320a8fc86196fa99b8c9 *inst/doc/Example02.R
e2312b24b0cadbbdb5c6e5773bb05eb0 *inst/doc/Example02.Rmd
1c940365257ca03185f5b02a339def4c *inst/doc/Example02.html
bb514520915b320a8fc86196fa99b8c9 *inst/doc/Example03.R
b3838d6617b0435efd7593c061437ffd *inst/doc/Example03.Rmd
bfd1ac2b0809ca778742c6ee5609d943 *inst/doc/Example03.html
91173f84edc0cfe447e6c2e198da0c23 *inst/doc/Example04.R
8360c8e552d864bb7d88f1fd50d02409 *inst/doc/Example04.Rmd
6d54b29e37ece9551c2f2da0de4ccffb *inst/doc/Example04.html
1a1e4765da00c52b607a9e2e37052cbd *inst/doc/LibraryOfModels.R
560c4e52dabdcb794266078ff242850a *inst/doc/LibraryOfModels.Rmd
fe1bbb9cd3dfd20320ba12fbbe6dedac *inst/doc/LibraryOfModels.html
1945267adfc85a83a595f4c320ce3905 *inst/doc/index.html
3414312bd2843a2595ba79347cfa5052 *inst/examples/covariate-test-minimal.R
5d7c49ed106b6554719f209d0cdb4807 *inst/examples/evaluation-minimal.R
7d8e50cacf4a276297a133f13c9a5d7d *inst/examples/gcsf-poped-evaluation.R
3ded99d9f479ea4b7037e24076bad591 *inst/fixtures/cov-iov-poster.R
f63ca0240bb0371f38a17620cf6594a3 *inst/fixtures/eval-opt-references.R
28303013d056cda749f5e8cb70bc3e81 *inst/fixtures/gold-fim.R
5618d8230f5321c21afa7d17b0865167 *inst/include/pfim/pfim-cache.hpp
1ccb1189f636aed323e3f626083f2a33 *inst/include/pfim/pfim-error.hpp
68126a2f80baceb2060078ba3a3b2907 *inst/include/pfim/pfim-linalg.hpp
c8a8648eb732b2737d1c7ce60e3f3f23 *inst/rmarkdown/pfim-report-tables.css
bce9714a7100f06a96becf288a0a0069 *inst/rmarkdown/templates/skeleton/EvaluationBayesianFIM.Rmd
0a616dadb941981fe18e86dc9a3e7daa *inst/rmarkdown/templates/skeleton/EvaluationIndividualFIM.Rmd
0a616dadb941981fe18e86dc9a3e7daa *inst/rmarkdown/templates/skeleton/EvaluationPopulationFIM.Rmd
bf5d93c7498be10cdaa921346e74aaa6 *inst/rmarkdown/templates/skeleton/OptimizationFedorovWynnAlgorithmBayesianFIM.Rmd
f0652d799269017a505234949247a804 *inst/rmarkdown/templates/skeleton/OptimizationFedorovWynnAlgorithmIndividualFIM.Rmd
e95ef8b3f2c612f43aef5dc4d01fc4e0 *inst/rmarkdown/templates/skeleton/OptimizationFedorovWynnAlgorithmPopulationFIM.Rmd
0390eae006106b3363411e2b1c4910a9 *inst/rmarkdown/templates/skeleton/OptimizationMultiplicativeAlgorithmBayesianFIM.Rmd
57b229d10d12558b3d66c8845e435920 *inst/rmarkdown/templates/skeleton/OptimizationMultiplicativeAlgorithmIndividualFIM.Rmd
57b229d10d12558b3d66c8845e435920 *inst/rmarkdown/templates/skeleton/OptimizationMultiplicativeAlgorithmPopulationFIM.Rmd
78e505495376a78d00d90478148e238e *inst/rmarkdown/templates/skeleton/OptimizationPGBOAlgorithmBayesianFIM.Rmd
f628e4e5d307486fcabe8caf530880d1 *inst/rmarkdown/templates/skeleton/OptimizationPGBOAlgorithmIndividualFIM.Rmd
b65037246999e6b04bc82199b48e61ea *inst/rmarkdown/templates/skeleton/OptimizationPGBOAlgorithmPopulationFIM.Rmd
78e505495376a78d00d90478148e238e *inst/rmarkdown/templates/skeleton/OptimizationPSOAlgorithmBayesianFIM.Rmd
f628e4e5d307486fcabe8caf530880d1 *inst/rmarkdown/templates/skeleton/OptimizationPSOAlgorithmIndividualFIM.Rmd
6d2d052d39be89418669dc3b32ca5070 *inst/rmarkdown/templates/skeleton/OptimizationPSOAlgorithmPopulationFIM.Rmd
9718c0b648814dc7e991f0fb3ff303f4 *inst/rmarkdown/templates/skeleton/OptimizationSimplexAlgorithmBayesianFIM.Rmd
f628e4e5d307486fcabe8caf530880d1 *inst/rmarkdown/templates/skeleton/OptimizationSimplexAlgorithmIndividualFIM.Rmd
b65037246999e6b04bc82199b48e61ea *inst/rmarkdown/templates/skeleton/OptimizationSimplexAlgorithmPopulationFIM.Rmd
755c94ba8ecc341b71b11958a7f10717 *inst/vignette-data/vignette1_evaluation_BayesianFIM.RDS
4957d6eb37bd18d3c9ecf0c03d7b17cf *inst/vignette-data/vignette1_evaluation_populationFIM.RDS
dc22560bfa73293e40c48f2e68de8749 *inst/vignette-data/vignette2_evaluation_BayesianFIM.RDS
9a150327774269c88d7d03a260a5f1a2 *inst/vignette-data/vignette2_evaluation_individualFIM.RDS
4e75193b8a982cbfbcdfe8bea633ba9c *inst/vignette-data/vignette2_evaluation_populationFIM.RDS
b53d32d8b2ee97e5b33ee614f4d226fa *inst/vignette-data/vignette3_evaluation_populationFIM.RDS
d3a9dd156b0a3f506b2e20372ddc3e5a *inst/vignette-data/vignette4_evaluation_populationFIM.RDS
1d9430a1c22fad4d2aa51941cf5ff409 *inst/vignette-scripts/example01_execute.R
1edfb90ddf6a2a76d1827e243ef1c92e *inst/vignette-scripts/example02_execute.R
8cb24607f735b48c1454025b9bfdd1eb *inst/vignette-scripts/example03_execute.R
254ba02dab2813651567ca5ab1446fdb *inst/vignette-scripts/example04_execute.R
4813b36a6857fce8e0ea579e621ded31 *inst/vignette-scripts/pfim-vignette-utils.R
15843ed2ce52f994e831943cdab2c3e4 *man/Additive.Rd
6f0e4829080f2ee6a126c9a725daa858 *man/Administration.Rd
89cf7ee24b2b38c240e475a04fb6fd1c *man/AdministrationConstraints.Rd
326867d80863c2d25f564d7e83e7c117 *man/Arm.Rd
e91724e1f59f1011779399686880883d *man/BayesianFim.Rd
aa84f09c7a67d9008e436215e03eda81 *man/CategoricalCovariate.Rd
1d46e8adda738bd1bc2db3e7a12d60a0 *man/CategoricalCovariateWithIOV.Rd
ee64d7268d8cd290aabc1c9c5359fa03 *man/Combined1.Rd
766c284e04d973a52d19f9e354c1108b *man/Combined2.Rd
74d8cc8a20e1269749d1f6d0e7604911 *man/Constant.Rd
d81c443eea8e8c53f0c202ba78e532bd *man/Covariate.Rd
f0fc21b77476507ac94459624eb3f044 *man/CovariateModelEquation.Rd
e9a3818bcedf375ecbff5f1e306b0ff9 *man/CovariateTest-class.Rd
7d37c5af4744ae8939a3525c45d02fe0 *man/Dcriterion.Rd
163456715be24ceeb3783a85b673af62 *man/Design.Rd
39aeb097a44452dd71f9b9f0b8e2ba65 *man/Distribution.Rd
267f6e64fbc62ab68adad56b0b333600 *man/Evaluation.Rd
20d3ef9b4ed72832810dcf82d2778a1e *man/Exponential.Rd
510ebdebaba70664212af8e5094b8fd4 *man/FedorovWynnAlgorithm.Rd
1502bfaeb56fe906ab295e1e82621583 *man/FedorovWynnAlgorithm_Rcpp.Rd
9e825722b5b0efc7116afed3f53abd41 *man/Fim.Rd
fad9ddd2efb83e84af4088450c138066 *man/IndividualFim.Rd
dbcb614891113ceb5502bc3c33926c50 *man/LibraryOfModels.Rd
395154b003c87465f5c403163663fee1 *man/LibraryOfPDModels.Rd
52e8e795f895b0ce1ae1585f123947ec *man/LibraryOfPKModels.Rd
a12b406ccac9116d0af1a27a08eba975 *man/Linear2BolusSingleDose_ClQV1V2.Rd
b76ac88dd4e400550b58620cfe0dec4a *man/Linear2BolusSingleDose_kk12k21V.Rd
9f5c98fdcffa238b4d6e551b1cd5352b *man/Linear2BolusSteadyState_ClQV1V2tau.Rd
973f31a1f7e38026d5ba1c226ad69dba *man/Linear2BolusSteadyState_kk12k21Vtau.Rd
c456a552d52199983679746ed5e47b99 *man/Linear2FirstOrderSingleDose_kaClQV1V2.Rd
11d993ae5e2cb19659d07b2f3355f76b *man/Linear2FirstOrderSingleDose_kakk12k21V.Rd
1336889d4766ef8bb7404298fc5f6182 *man/Linear2FirstOrderSteadyState_kaClQV1V2tau.Rd
d660c0c20bdbcebb0f419a5b75a77690 *man/Linear2FirstOrderSteadyState_kakk12k21Vtau.Rd
115ab4c3f015d8798fa6607ca419455f *man/Linear2InfusionSingleDose_ClQV1V2.Rd
f88f3c6aedad286aca51c39830be8a45 *man/Linear2InfusionSingleDose_kk12k21V.Rd
7276ca3d4f7b50ec74f53d2266cdbf58 *man/Linear2InfusionSteadyState_ClQV1V2tau.Rd
9d0f9bf511c72545172eef1b119d9837 *man/Linear2InfusionSteadyState_kk12k21Vtau.Rd
bead535246a8f41ed25c495b67c8a78a *man/LogNormal.Rd
022913ee91bdbba6996867dba6543c2d *man/Model.Rd
aa561fa5fae3909dfa52177752d8187b *man/ModelAnalytic.Rd
40a3633784e0e301b19448cf33b48724 *man/ModelAnalyticInfusion.Rd
c6b9dd2e2971f5a3fb05656ea4581c60 *man/ModelAnalyticInfusionSteadyState.Rd
0c8f209dcdf7fb4e493195b6346e44e7 *man/ModelAnalyticSteadyState.Rd
8e0d25c750b61553b3cf16864aa4fc55 *man/ModelError.Rd
a706d8db5ae38fea3a6e961625179781 *man/ModelInfusion.Rd
e0453e439bdb6c46edc8629ee383a8ea *man/ModelODE.Rd
d5e1ccd34618747c54caadfd6cda97f3 *man/ModelODEBolus.Rd
7f59c9336845f0599abc00be776d783d *man/ModelODEDoseInEquations.Rd
6c5002f8f60ae5ab69f6a229f7a85d99 *man/ModelODEDoseNotInEquations.Rd
c5f654bfe42aee1407913305643ad65d *man/ModelODEInfusion.Rd
5234ae2285f4621676dac2cf67990957 *man/ModelODEInfusionDoseInEquation.Rd
a9cb0f16be503a3e0c839109558e05cb *man/ModelParameter.Rd
a0b4af9fb2067399de3023afb5655187 *man/MultiplicativeAlgorithm.Rd
0bed62aebc010c0c9d44ef029f63a288 *man/MultiplicativeAlgorithm_Rcpp.Rd
45eb37b281c50621283cf2d2ff62219c *man/Normal.Rd
6abdb4099dbbd6ac16de7f00afff6351 *man/Optimization.Rd
b0116757f591eb6b64fa72cf3594e1eb *man/PFIM-package.Rd
dcfa29e5904f3f3b521b56eea025f326 *man/PFIMProject.Rd
62b8d5d4918cb14e16a198d134b07bfd *man/PGBOAlgorithm.Rd
8218f55cfcb4c39c42c2379797a5615b *man/PSOAlgorithm.Rd
960d24edf2c5526b2c99752062188df7 *man/PopulationFim.Rd
e1c8387ef1ee2daa2feac9ed28af4d58 *man/Proportional.Rd
6a89df77869a20cba40e59fac7b196a8 *man/Report.Rd
bcb2f3f75746b4c2bea75fd1b7da752b *man/SamplingTimeConstraints.Rd
ea54e38b41866099474bcdc892695af0 *man/SamplingTimes.Rd
b2f41a7f025037bdee4bd29c9fc7e442 *man/SimplexAlgorithm.Rd
1835a7a002e0b7c302d261f279056592 *man/adjustGradient.Rd
c9a196e382dc64ba4fe452dc10727625 *man/aggregateGradientsWithCovariates.Rd
c27b44acf0fea1bf52956c4187ebf92b *man/aggregateVarianceWithCovariates.Rd
7bb4e880029dbe04644a83a838f42c2b *man/armAdministration.Rd
58eb51f25cb027a4d6243130031bae87 *man/checkSamplingTimeConstraintsForMetaheuristic.Rd
a1c47ca8816a8d663338f941e1fde0e6 *man/checkValiditySamplingConstraint.Rd
17aeda50eb07ba1fa993fb90a0504fa2 *man/computeCovariateValue.Rd
9ef946da3195a8af9983ec8df1c77b87 *man/constraintsTableForReport.Rd
ccbbb5290eea09efff11f6f80f61dd46 *man/convertPKModelAnalyticToPKModelODE.Rd
cf43eedd03674bb286e008859bc62ffc *man/covariateTest.Rd
f4bd51e6b8cd13009e443940308d5a64 *man/createEffectVector.Rd
12be7535f1a7df42b841c363946f5848 *man/defineCovariatesData.Rd
360b7950c1feed6e23dfc78ebf00815d *man/defineFim.Rd
428c0f3eb0d1dc2f697c30e048257d5b *man/defineModelAdministration.Rd
b75566d0e57cfcb9f5289c1e732f1770 *man/defineModelEquationsFromLibraryOfModel.Rd
4a91d2e221551115832a6899f84f489d *man/defineModelType.Rd
7acbafb25a9c196dedfed76edbe0cda8 *man/defineModelWrapper.Rd
d510aee9a5d76a7999a015c069d734e8 *man/defineOptimizationAlgorithm.Rd
96cc1de7aff9201b7b276bcaf334ebb8 *man/definePKModel.Rd
06ee53dfa40585ceb298500e254f5c1a *man/definePKPDModel.Rd
c5e667cced9ea07e0249152a1cc678f8 *man/ensureModelOutputNames.Rd
b5d25ed218e5e9690f993f7f08f557f8 *man/evaluateAnalyticCore.Rd
f73662fa3dd4fb674d72c61e17f0cb3a *man/evaluateAnalyticInfusionCore.Rd
d32342fef36f0a31446fbbb5c26ac9fd *man/evaluateAnalyticInfusionSteadyStateCore.Rd
82f8b48e7ba245a33daee5ab401fb7a0 *man/evaluateAnalyticSteadyStateCore.Rd
c9d963db3ae2947efa2bb6883ec39546 *man/evaluateArm.Rd
9fbdb3f87cfec10ab9e59a1ec4051574 *man/evaluateCovariatesEffects.Rd
7d7f5d3136b3f7f6ca13b75ab6428bf3 *man/evaluateDesign.Rd
5306e6c60119836467ec58400b0c9957 *man/evaluateErrorModelDerivatives.Rd
7d13bccceb5737d89ceae9026edd9a5d *man/evaluateFim.Rd
d86bba1387a42c284cd9446f05a81dfb *man/evaluateInitialConditions.Rd
128b50281b7d9d2fb6826948c6e471c6 *man/evaluateModel.Rd
0a5b13e207b7bcbd423a90708ef8afdf *man/evaluateModelGradient.Rd
95df4f8e0aca3ddf067e9074faa0809c *man/evaluateModelGradientCore.Rd
5a874bb3eaa4f79bb6525564c407d494 *man/evaluateModelGradientWithCovariates.Rd
6a39f5fd0c13f81e8888d81920face9a *man/evaluateModelVariance.Rd
92a7cfe3196f59281275117ef7292652 *man/evaluateModelWithCovariates.Rd
34631d3ddd8cc49b11d4789bb8d7f43c *man/evaluateOmegaMatrixFromCovariates.Rd
3dca49000505e5fd6efefa722ce7635a *man/evaluateVarianceFIM.Rd
ac916cbd4369cd51690865dd8a15769c *man/finiteDifferenceHessian.Rd
98fa6e63013645fc16849dabbe452d81 *man/fun_amoeba_Rcpp.Rd
2cd1916731d8f9f9206a38ed1a525922 *man/generateCovariatesCombination.Rd
e522c52f1bee5a9946263f4694f2b430 *man/generateDosesCombination.Rd
ed7b72dabbf27cc7054586e8f22976b0 *man/generateFimsFromConstraints.Rd
b1218c9db76ee34f9bfe267a59a3318b *man/generateReportEvaluation.Rd
111dc82f0c732ffc1067c79d5afe8cab *man/generateReportOptimization.Rd
eb570030770141ec5d589a7abb5ba482 *man/generateSamplingTimesCombination.Rd
11095ae6ad29e5fb891bdc19badaeb05 *man/generateSamplingsFromSamplingConstraints.Rd
edf9c96e22bcc2fbf23f5c9d8207fac3 *man/getArmConstraints.Rd
808d161aebbf159477f000e20ec3515c *man/getArmData.Rd
4ebf33647d69c608c09c6c4ed4558f2b *man/getArmEvaluationGradientsMatrix.Rd
759ba2606487d3d69274ca164440ed9b *man/getArmEvaluationVarianceFlat.Rd
46e1b13237b769e8e28e09a7bae9fc3f *man/getCategoryOfReference.Rd
f2e76c14bd39ea44ad848ef9fa05db49 *man/getCorrelationMatrix.Rd
b66dfd7ffea8d1723c229f00ab4eddd0 *man/getCovariateEffects.Rd
09c394b48e807a3ac4fd1ddbb2617c55 *man/getCovariateTestTables.Rd
4277a102f054455f2895c159849720a6 *man/getDcriterion.Rd
3cf81cd6664362010304ebf2b3791d58 *man/getDeterminant.Rd
c68918d1decd0e310e262232c63a8ea0 *man/getEvaluationDesign.Rd
e7f811bbd004bc1f05587993f2afda11 *man/getFim.Rd
157bf34b618c93094759e8ecb564391c *man/getFisherMatrix.Rd
01ffcf070f5346a56df7e30310ad86bf *man/getMixtureDcriterion.Rd
ba0ae09f96a474e5c08bd2b925274cfc *man/getModelErrorData.Rd
7e341216f79d44bd560d5c7fd2befde3 *man/getModelParametersData.Rd
21036bc0f826df53e9eab90146c848b5 *man/getNumberOfOccasionsForModel.Rd
5342c236a00acf9656de15c182889e40 *man/getOccasionsFromIOVCovariates.Rd
91d8f6452c2e6df4b8c7bf89b6b3c776 *man/getRSE.Rd
43394a38f42a3827505f07b6e7609ee1 *man/getRealisedDcriterion.Rd
27e4bea79cd6e605f0d968ebccdce137 *man/getSE.Rd
533f5e97643c3d5a622cf6a6d6d55b5e *man/getSamplingData.Rd
2f151ab69caf118d9ebf9aa91cc1bf66 *man/getShrinkage.Rd
89a316bdc3cd519144f3743a4be94274 *man/hasCovariates.Rd
5fe4f5ffe3b26812ce4b1c963e9edbd8 *man/inferNumberOfOccasions.Rd
b668372813a44cd4f869e39a22ae5b96 *man/modelParametersWithCovariates.Rd
9f38a0e92151841719f509097e596190 *man/optimizeDesign.Rd
a8adb5f5e76ff749212a5d0d796fc2ed *man/parseCombinationName.Rd
50bc36c807390622b940b54e128aa33b *man/pdModelLibrary.Rd
ce58e792e127722f3ec7890a29d74410 *man/pfim-arm-constraints.Rd
5cc82519ccad1d12b0ea3a276caca58a *man/pfim-constraints-helpers.Rd
8ceee4640d8c86fb52079532de9eab4f *man/pfim-extensions.Rd
d8fea3c86386ebc17ef59570c8445d7a *man/pfim-fim-optimizer-wiring.Rd
f792aa151b4c170c6195ccba17e082fc *man/pfim-registry.Rd
e8777c47a369b732bba48244340319dd *man/pfim_cache_stats.Rd
cfe58df74b545bb6c5de4cb28f79034b *man/pfim_get_option.Rd
ee1822158bb119e8156c15719a3545ea *man/pfim_list_extensions.Rd
16e0e913242b6e5990c43b39461d6baf *man/pfim_register_fim_type.Rd
74d2879028a2124e11c9ad5d81ad32b3 *man/pfim_register_model_class.Rd
d7aae1fcffab5a85efa35f0441ac25a8 *man/pfim_register_optimizer.Rd
598c648e4ef98a1593844abb14561683 *man/pfim_registered_model_classes.Rd
b36d7a31a2d04de9cc37e80d6e16e8b4 *man/pfim_reset_session.Rd
8b6b3d9585ecd4409b4d3c71a0809775 *man/pfim_resolve_model_class.Rd
75d20621ec8ea02f19e6c1d44c3f4409 *man/pfim_set_option.Rd
5e9a4c32eb98d985faf260fb986a61b0 *man/pgbo_optimize_Rcpp.Rd
1015176590ba0cbbff57c3c1573fd3cf *man/pkModelLibrary.Rd
b8c79588b1f6fc1c4bf4142ca6016cc9 *man/plotEvaluation.Rd
070948af13453f45b528fc57aba0b126 *man/plotEvaluationResults.Rd
45b95ddcfa493dfb4501ddabef927671 *man/plotEvaluationSI.Rd
9fa9f2ddc354930f919a2dface861a26 *man/plotFrequencies.Rd
d56e408dcd2b3ab24db6acb7afa1a879 *man/plotFrequenciesFedorovWynnAlgorithm.Rd
951406a71bc86bd9c1c8db372744da64 *man/plotRSE.Rd
a4ed7fc6e868a2bf129e57ce9d3cf42e *man/plotRSEFIM.Rd
fba83d2157befcda75709ab5ceb98b0a *man/plotSE.Rd
e02a95e759a5923d05e49febfab68553 *man/plotSEFIM.Rd
fe20890381c3d54af76c95dccd0ef039 *man/plotSensitivityIndices.Rd
9ada968f438c83632bbda4fe9e8374be *man/plotShrinkage.Rd
8a699cd3c99d2d9ea8f5f34acb1f1def *man/plotWeights.Rd
7a3b830f2c60b47ca712ac141a6a0d01 *man/plotWeightsMultiplicativeAlgorithm.Rd
725679d78c63a305d8e8d48e39e07909 *man/processArmEvaluationResults.Rd
959e88966dab063d8a1a5dbc55249f9f *man/processArmEvaluationSI.Rd
15b33f0ab44b465dc8861381ab09b5fd *man/projectOf.Rd
aa9b8712f1c600932f1c3ba46e4426c7 *man/projectProp.Rd
d538e5dbd28f2d55745d1aaf387262b1 *man/prop.Rd
4642fa8d0941d4710fc62b3d2a398d8b *man/pso_optimize_Rcpp.Rd
d21a35fa37fc0b4c51bbbc79a3766515 *man/rebuildEvalModel.Rd
ea5de77cf297c233ee6d3ab07f86671d *man/remapOdePkLibraryEquations.Rd
01188be52fde83519eba09e677cbb469 *man/remapOdePkLibraryText.Rd
e7f9ae23b3500aac5171837e54018bbb *man/remapPkpdLibraryEquations.Rd
9b3815511f6f63b92812871774ca8a08 *man/remapPkpdLibraryText.Rd
2e1902ca0859d3f99c79b8fb4f299c3e *man/replaceVariablesLibraryOfModels.Rd
c38ef1a7ddf8446c9e28a2cf106b40ce *man/resolveNumberOfOccasions.Rd
af694bffa632192cf7dafd1181639142 *man/run.Rd
54793d0f2332d5fed4086ea9df2af972 *man/s7-reexports.Rd
cc37a448a388f689419cb541c8b53b60 *man/saveCovariateTest.Rd
007b1404d189703aa73074fb856a0285 *man/setEvaluationFim.Rd
ef799600ee63bf979e4e29caf1a81d55 *man/setOptimalArms.Rd
3f2ecd2ab15b761ecfce574b25b31135 *man/setSamplingConstraintForOptimization.Rd
1a337768527b2641d9a275658d9ac3da *man/show-methods.Rd
169ff5ad4b2b78c8feaa9f57121cdb83 *man/showFIM.Rd
657777a393652b6142e05da6e1fb015a *man/tablesForReport.Rd
c3a26d215b2a1984b985adcf3de1897f *man/updateSamplingTimes.Rd
a0aa4d062f48abb0156e53c716e2740c *man/usesCovariateOccasionStructure.Rd
7b8995ebbbaaaf7da290407dbe5bbb9c *src/FedorovWynnAlgorithm.cpp
bc2a8fd23a24d5265206230b40a10d3b *src/Makevars
bc2a8fd23a24d5265206230b40a10d3b *src/Makevars.win
d212b46921b33969852255f503125606 *src/MultiplicativeAlgorithm.cpp
e8df0e0ed33d6f2b35dadb5635b39263 *src/PGBOAlgorithm.cpp
9c617db4e37d44cff0968dd6354f7ecb *src/PSOKernel.cpp
8edfe306f9a3529f647f72803b7539fa *src/RcppExports.cpp
2f080404f57961ed20a6e907a8b23a80 *src/SimplexAlgorithm.cpp
a3ff3336b126b372b8a353a792eae321 *src/compute-linalg.cpp
db5d1887658927a3f2f3294b361984fe *src/compute-mfvar.cpp
d32259840938f59e33551929b3bf6673 *src/compute-pop-fim-combo.cpp
54774b859affc38161980ed38b1c0958 *src/compute-residual-error.cpp
837bfd7c64854c79b7a70eb9d06c426d *src/init.c
186dcc97d8e97e318afb447b35ee5076 *src/ode-cache.cpp
9acb59b059b99fe09ab7e8be46d6e36a *tests/testthat.R
73b5a99777f17890d3075ee599684d24 *tests/testthat/helper-assign-in-call.R
2827d164fc2d9258cf1b484921b4174d *tests/testthat/helper-cas10.R
5da6625f114032591a4e8f3f385385ec *tests/testthat/helper-cov-iov-poster.R
c7b7665539a15c74ee5daf9333a3ef4d *tests/testthat/helper-eval-opt-references.R
371c2e6d5ef5ebbff301cd5484f825ca *tests/testthat/helper-expect-s7.R
7ecf427b2ebfc074d239a79f47fec8b7 *tests/testthat/helper-gold-fim.R
86d1246ae815d8c171d2f6667b3f9be3 *tests/testthat/helper-linalg-cpp.R
22fb8cadbf0d7dab01bda0c6a497bde6 *tests/testthat/helper-ode-opt.R
352b39c029349c61f06cad0cf6bbd23b *tests/testthat/helper-opt-access.R
94a89e397b76a3e0653830102ce9aca7 *tests/testthat/test-analytic-eval.R
61775ed4d61cb5c493f8926db8c2c5d1 *tests/testthat/test-arm-sampling-plots.R
a98613bfad04ad995620820199f9b2bc *tests/testthat/test-bayesian-fim-branches.R
ff420efc780e094293ef40c62d8068cf *tests/testthat/test-code-style.R
8dda64ac883d63e48ea59205afb87e77 *tests/testthat/test-combined2-fim-types.R
4c9abb530c10a320e945b13c1af6cf87 *tests/testthat/test-cov-iov-poster.R
fdce5738018371e5d4c07cb8bcf9e2f1 *tests/testthat/test-covariate-test.R
9581037246e4915998577fdabb8221a5 *tests/testthat/test-cpp-kernels.R
4f1406e1ad2eae197adef7b523022840 *tests/testthat/test-cran-review.R
2b3766d1e9c6fc068dc1047368addf35 *tests/testthat/test-eval-opt-references.R
cb4a5c08e38a94fc177befef2cfaceed *tests/testthat/test-example-basic.R
4a12776beb9bbfbe78253821fba69dcb *tests/testthat/test-example-pk-1cpt.R
fb845dd3f826f113a7cc1e79f12a1d57 *tests/testthat/test-example-pk-2cpt.R
ada02d90f84540dba9c70939bfee4653 *tests/testthat/test-example-pk-mm.R
db91d7f73e8cf795b58c55aae05e0680 *tests/testthat/test-fim-cache.R
1b72cc75e9482a859a6f68a1f34ced10 *tests/testthat/test-fim-covariates-helpers.R
bc59d41faedaa55f3efd2c41b4888e32 *tests/testthat/test-fim-pipeline.R
9fae5c428c80dd6200173a576da8bf0e *tests/testthat/test-fim-quality.R
a0f8076e2b9ceade619ed3b9b783acc9 *tests/testthat/test-gcsf-poped.R
da3864a6b0a1c3b5b2593f189f5eeeb2 *tests/testthat/test-gold-fim.R
004a796ec4d34ae3d590dcb9c344c505 *tests/testthat/test-gradient-perf.R
58907663bb2efa948d77961e59c81381 *tests/testthat/test-guards.R
9899ed2fd67f2540cdc72cfeed521992 *tests/testthat/test-infusion-covariates.R
87a081142b54225fab919b85c483d0a0 *tests/testthat/test-infusion-pkpd-ode.R
e44c743445123bfa67078ffdc83b2ffc *tests/testthat/test-infusion-steady-state.R
e56f1e4043cd2f1725f24f70659c9d5c *tests/testthat/test-joint-mult-iov.R
04bfce4e2625d00e47db90c0dd898090 *tests/testthat/test-library-catalogue.R
9b192fd4c5cab846077d75021346a76e *tests/testthat/test-linalg-cpp.R
47eb6406dcb73c4f00f2a19def771805 *tests/testthat/test-mfvar-cpp.R
cfffb8fffd25e8cf2ce4420ffa5add05 *tests/testthat/test-minor-polish.R
803cad2062c42f64f2438b5d2965f1d7 *tests/testthat/test-model-error.R
8b9f598ac18e84d152c64573d9af0cb5 *tests/testthat/test-model-type-dispatch.R
2114c8233dff5d4a883f004cb79b8a92 *tests/testthat/test-ode-cache-cpp.R
abea4a418e696ff9fabeb62e27065e8f *tests/testthat/test-ode-models.R
2ae686fc81e02078e9e857b553ca2b1f *tests/testthat/test-ode-report.R
4e8b40f057b13b6354ba5bd845077daa *tests/testthat/test-optimization-accessors.R
37ba0c8fbe9fd4c69d0d3d8cc041b7c0 *tests/testthat/test-optimization-algorithms.R
9cf4765e5b5c768a8c181b8ef4fb2bd1 *tests/testthat/test-optimization-metaheuristic.R
414748d14857b4b16e92f7c5e35b4bc1 *tests/testthat/test-pfim-architecture.R
86085d4d2c11fa995d49638694b97e5b *tests/testthat/test-pfim-joint-mult-shrink.R
b982e966fcff36dd7df2cd5cc021b9b4 *tests/testthat/test-pkpd-covariate.R
350db0427c74349a04a088669e33c27d *tests/testthat/test-pkpd-ode-outputs.R
48a377672a9cbb119fc3b5013733d1e1 *tests/testthat/test-pop-fim-cov-combo.R
64e45dd131513ae30fe4343cfc9a19cf *tests/testthat/test-pop-mu-chain.R
8a657b3ab9b127cf6374b30db5b075c3 *tests/testthat/test-reports.R
cb026c6cee82e447de09120bf4b4089a *tests/testthat/test-review-fixes.R
9ee14a42790ec923af475df35340f447 *vignettes/Example01.Rmd
e2312b24b0cadbbdb5c6e5773bb05eb0 *vignettes/Example02.Rmd
b3838d6617b0435efd7593c061437ffd *vignettes/Example03.Rmd
8360c8e552d864bb7d88f1fd50d02409 *vignettes/Example04.Rmd
560c4e52dabdcb794266078ff242850a *vignettes/LibraryOfModels.Rmd
755c94ba8ecc341b71b11958a7f10717 *vignettes/data/vignette1_evaluation_BayesianFIM.RDS
4957d6eb37bd18d3c9ecf0c03d7b17cf *vignettes/data/vignette1_evaluation_populationFIM.RDS
dc22560bfa73293e40c48f2e68de8749 *vignettes/data/vignette2_evaluation_BayesianFIM.RDS
9a150327774269c88d7d03a260a5f1a2 *vignettes/data/vignette2_evaluation_individualFIM.RDS
4e75193b8a982cbfbcdfe8bea633ba9c *vignettes/data/vignette2_evaluation_populationFIM.RDS
875ce6d0922c6da58c8778df558cc813 *vignettes/data/vignette2_optimization_PGBO_populationFIM.RDS
329ceb66b2567cda0992a38fde25e4bb *vignettes/data/vignette2_optimization_PSO_populationFIM.RDS
36693efec5bad93c757ec39ab966164a *vignettes/data/vignette2_optimization_Simplex_populationFIM.RDS
b53d32d8b2ee97e5b33ee614f4d226fa *vignettes/data/vignette3_evaluation_populationFIM.RDS
7a4160b45e2a53434d5fd24d4aac88df *vignettes/data/vignette3_optimization_Mult_populationFIM.RDS
efd8717c79d2c736b49f4f7adc8c3925 *vignettes/data/vignette3_optimization_Simplex_populationFIM.RDS
d3a9dd156b0a3f506b2e20372ddc3e5a *vignettes/data/vignette4_evaluation_populationFIM.RDS
dc392ca6b26eddc161ae4cbec5cb7e90 *vignettes/data/vignette_1_optimization_FedorovWynn_populationFIM.RDS
28a6174b1dc3ab9c28487bc15cfbd654 *vignettes/data/vignette_1_optimization_multiplicativeAlgorithm_populationFIM.RDS
b3c5f19132f6ee55a05af767052d3bbf *vignettes/references.bib
