CRAN Package Check Results for Package CohortGenerator

Last updated on 2026-05-14 12:51:43 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.0 16.43 286.64 303.07 OK
r-devel-linux-x86_64-debian-gcc 1.1.0 12.73 180.23 192.96 ERROR
r-devel-linux-x86_64-fedora-clang 1.1.0 31.00 411.12 442.12 OK
r-devel-linux-x86_64-fedora-gcc 1.1.0 29.00 502.50 531.50 OK
r-devel-windows-x86_64 1.1.0 20.00 321.00 341.00 OK
r-patched-linux-x86_64 1.1.0 17.80 285.40 303.20 OK
r-release-linux-x86_64 1.1.0 16.16 281.21 297.37 OK
r-release-macos-arm64 1.1.0 4.00 90.00 94.00 OK
r-release-macos-x86_64 1.1.0 12.00 385.00 397.00 OK
r-release-windows-x86_64 1.1.0 20.00 322.00 342.00 OK
r-oldrel-macos-arm64 1.1.0 OK
r-oldrel-macos-x86_64 1.1.0 12.00 284.00 296.00 OK
r-oldrel-windows-x86_64 1.1.0 26.00 398.00 424.00 OK

Check Details

Version: 1.1.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘CreatingCohortSubsetDefinitions.Rmd’ using rmarkdown Quitting from CreatingCohortSubsetDefinitions.Rmd:190-212 [unnamed-chunk-8] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error: ! 'duckdb' must be installed for this functionality. --- Backtrace: ▆ 1. └─DatabaseConnector::connect(duckdbConnectionDetails) 2. └─DatabaseConnector:::connectDuckdb(connectionDetails) 3. └─DatabaseConnector:::ensure_installed("duckdb") ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'CreatingCohortSubsetDefinitions.Rmd' failed with diagnostics: 'duckdb' must be installed for this functionality. --- failed re-building ‘CreatingCohortSubsetDefinitions.Rmd’ --- re-building ‘GeneratingCohorts.Rmd’ using rmarkdown trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip' Content type 'application/zip' length 6861852 bytes (6.5 MB) ================================================== downloaded 6.5 MB --- finished re-building ‘GeneratingCohorts.Rmd’ --- re-building ‘SamplingCohorts.Rmd’ using rmarkdown --- finished re-building ‘SamplingCohorts.Rmd’ --- re-building ‘UsingTemplateCohorts.Rmd’ using rmarkdown trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip' Content type 'application/zip' length 6861852 bytes (6.5 MB) ================================================== downloaded 6.5 MB --- finished re-building ‘UsingTemplateCohorts.Rmd’ SUMMARY: processing the following file failed: ‘CreatingCohortSubsetDefinitions.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc