Last updated on 2025-10-26 00:48:50 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.13 | 252.16 | 265.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.09 | 267.58 | 277.67 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 58.00 | 285.70 | 343.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 85.00 | 308.08 | 393.08 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.00 | 274.06 | 289.06 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.93 | 258.75 | 273.68 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 23.00 | 373.00 | 396.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 20.00 | 342.00 | 362.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 239.00 | 263.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [92s/289s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.603, system: 0.083, elapsed: 4.534 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.551, system: 0.404, elapsed: 28.169 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.033, elapsed: 0.430 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.155, system: 0.515, elapsed: 15.434 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.014, elapsed: 0.568 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.405, system: 1.499, elapsed: 52.446 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.894, system: 0.147, elapsed: 6.031 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.812, system: 0.642, elapsed: 24.131 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.045, elapsed: 0.803 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.350, system: 0.519, elapsed: 25.230 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.013, elapsed: 1.104 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.164, system: 1.868, elapsed: 61.296 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.830, system: 0.109, elapsed: 6.871 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.667, system: 0.447, elapsed: 40.660 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.035, elapsed: 1.180 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.271, system: 0.547, elapsed: 18.835 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.009, elapsed: 0.571 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.346, system: 0.449, elapsed: 4.615 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.277, system: 2.010, elapsed: 77.989 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.646, system: 0.083, elapsed: 6.969 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.358, system: 0.226, elapsed: 26.186 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.035, elapsed: 0.463 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.065, system: 0.371, elapsed: 10.231 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.007, elapsed: 0.421 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.050, system: 0.964, elapsed: 30.311 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.222, system: 1.902, elapsed: 77.227 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [92s/259s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.826, system: 0.131, elapsed: 4.060 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.709, system: 0.536, elapsed: 28.451 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.035, elapsed: 0.850 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.064, system: 0.454, elapsed: 12.265 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.021, elapsed: 0.492 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.659, system: 1.614, elapsed: 48.856 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.732, system: 0.101, elapsed: 4.588 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.675, system: 0.511, elapsed: 28.181 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.038, elapsed: 0.994 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.426, system: 0.562, elapsed: 15.783 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.025, elapsed: 0.671 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.903, system: 1.588, elapsed: 53.341 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.865, system: 0.133, elapsed: 5.649 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.475, system: 0.374, elapsed: 29.788 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.036, elapsed: 0.780 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.078, system: 0.477, elapsed: 13.476 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.029, elapsed: 0.738 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.185, system: 0.393, elapsed: 4.002 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.805, system: 1.934, elapsed: 58.283 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.649, system: 0.083, elapsed: 7.023 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.379, system: 0.229, elapsed: 22.634 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.041, elapsed: 0.906 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.124, system: 0.445, elapsed: 13.479 seconds]
Computing values for grid cells...
... done. [user: 0.194, system: 0.014, elapsed: 0.501 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.100, system: 1.088, elapsed: 33.121 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.449, system: 2.266, elapsed: 80.731 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64