Last updated on 2026-07-18 00:52:27 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.3.3 | 1.57 | 180.50 | 182.07 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.3.3 | 1.47 | 123.92 | 125.39 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.3.3 | 292.90 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.3.3 | 120.71 | OK | |||
| r-devel-windows-x86_64 | 0.3.3 | 5.00 | 154.00 | 159.00 | ERROR | |
| r-patched-linux-x86_64 | 0.3.3 | 2.70 | 54.93 | 57.63 | ERROR | |
| r-release-linux-x86_64 | 0.3.3 | 2.27 | 54.74 | 57.01 | ERROR | |
| r-release-macos-arm64 | 0.3.3 | 1.00 | 48.00 | 49.00 | OK | |
| r-release-macos-x86_64 | 0.3.3 | 2.00 | 251.00 | 253.00 | OK | |
| r-release-windows-x86_64 | 0.3.3 | 6.00 | 142.00 | 148.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.3.3 | OK | ||||
| r-oldrel-macos-x86_64 | 0.3.3 | 2.00 | 133.00 | 135.00 | OK | |
| r-oldrel-windows-x86_64 | 0.3.3 | 6.00 | 172.00 | 178.00 | ERROR |
Version: 0.3.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'multpois.Rmd' using rmarkdown
Quitting from multpois.Rmd:377-379 [unnamed-chunk-24]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! Downdated VtV is not positive definite
---
Backtrace:
▆
1. └─multpois::glmer.mp.con(m8, pairwise ~ Age * Season, adjust = "holm")
2. └─lme4::glmer(formula = f, data = d0, family = poisson, ...)
3. └─lme4::optimizeGlmer(...)
4. └─lme4:::optwrap(...)
5. ├─base::withCallingHandlers(...)
6. ├─base::do.call(optfun, arglist)
7. └─lme4 (local) `<fn>`(...)
8. ├─nM$newf(fn(nM$xeval()))
9. │ └─base::stopifnot(length(value <- as.numeric(value)) == 1L)
10. └─lme4 (local) fn(nM$xeval())
11. └─lme4 (local) pwrssUpdate(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'multpois.Rmd' failed with diagnostics:
Downdated VtV is not positive definite
--- failed re-building 'multpois.Rmd'
SUMMARY: processing the following file failed:
'multpois.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-windows-x86_64, r-oldrel-windows-x86_64
Version: 0.3.3
Check: examples
Result: ERROR
Running examples in ‘multpois-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: Anova.mp
> ### Title: ANOVA-style results for a multinomial-Poisson model
> ### Aliases: Anova.mp
>
> ### ** Examples
>
> library(multpois)
>
> ## two between-subjects factors (X1,X2) with polytomous response (Y)
> data(bs3, package="multpois")
>
> bs3$PId = factor(bs3$PId)
> bs3$Y = factor(bs3$Y)
> bs3$X1 = factor(bs3$X1)
> bs3$X2 = factor(bs3$X2)
> contrasts(bs3$X1) <- "contr.sum"
> contrasts(bs3$X2) <- "contr.sum"
>
> m1 = glm.mp(Y ~ X1*X2, data=bs3)
> Anova.mp(m1, type=3)
Analysis of Deviance Table (Type III tests)
Response: Y
via the multinomial-Poisson trick
Chisq Df N Pr(>Chisq)
X1 3.5327 2 60 0.17096
X2 7.8081 2 60 0.02016 *
X1:X2 4.0039 2 60 0.13507
---
Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
>
> ## two within-subjects factors (X1,X2) with polytomous response (Y)
> data(ws3, package="multpois")
>
> ws3$PId = factor(ws3$PId)
> ws3$Y = factor(ws3$Y)
> ws3$X1 = factor(ws3$X1)
> ws3$X2 = factor(ws3$X2)
> contrasts(ws3$X1) <- "contr.sum"
> contrasts(ws3$X2) <- "contr.sum"
>
> m2 = glmer.mp(Y ~ X1*X2 + (1|PId), data=ws3)
Error: Downdated VtV is not positive definite
Execution halted
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.3.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘multpois.Rmd’ using rmarkdown
Quitting from multpois.Rmd:305-309 [unnamed-chunk-18]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! Downdated VtV is not positive definite
---
Backtrace:
▆
1. └─multpois::glmer.mp(Y ~ X1 * X2 + (1 | PId), data = ws3)
2. └─lme4::glmer(formula = f, data = df, family = poisson, ...)
3. └─lme4::optimizeGlmer(...)
4. └─lme4:::optwrap(...)
5. ├─base::withCallingHandlers(...)
6. ├─base::do.call(optfun, arglist)
7. └─lme4 (local) `<fn>`(...)
8. ├─nM$newf(fn(nM$xeval()))
9. │ └─base::stopifnot(length(value <- as.numeric(value)) == 1L)
10. └─lme4 (local) fn(nM$xeval())
11. └─lme4 (local) pwrssUpdate(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'multpois.Rmd' failed with diagnostics:
Downdated VtV is not positive definite
--- failed re-building ‘multpois.Rmd’
SUMMARY: processing the following file failed:
‘multpois.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.3.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'multpois.Rmd' using rmarkdown
Quitting from multpois.Rmd:377-379 [unnamed-chunk-24]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `solve.default()`:
! system is computationally singular: reciprocal condition number = 8.98484e-56
---
Backtrace:
▆
1. └─multpois::glmer.mp.con(m8, pairwise ~ Age * Season, adjust = "holm")
2. ├─car::Anova(m, type = 3)
3. └─car:::Anova.merMod(m, type = 3)
4. └─car:::Anova.mer(...)
5. └─car:::Anova_III_mer(mod, test = test.statistic, vcov., singular.ok = singular.ok)
6. ├─car::linearHypothesis(...)
7. └─car:::linearHypothesis.merMod(...)
8. └─car:::linearHypothesis.mer(...)
9. ├─base::as.vector(...)
10. ├─base::solve(L %*% V %*% t(L))
11. └─base::solve.default(L %*% V %*% t(L))
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'multpois.Rmd' failed with diagnostics:
system is computationally singular: reciprocal condition number = 8.98484e-56
--- failed re-building 'multpois.Rmd'
SUMMARY: processing the following file failed:
'multpois.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-windows-x86_64