CRAN Package Check Results for Package pagoda2

Last updated on 2026-08-04 12:50:53 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.15 142.74 134.37 277.11 NOTE
r-devel-linux-x86_64-debian-gcc 1.0.15 92.58 93.58 186.16 NOTE
r-devel-linux-x86_64-fedora-clang 1.0.15 195.00 203.90 398.90 OK
r-devel-linux-x86_64-fedora-gcc 1.0.15 97.00 85.32 182.32 OK
r-devel-windows-x86_64 1.0.15 157.00 150.00 307.00 OK
r-patched-linux-x86_64 1.0.15 130.41 125.40 255.81 OK
r-release-linux-x86_64 1.0.15 123.89 124.76 248.65 OK
r-release-macos-arm64 1.0.15 25.00 21.00 46.00 OK
r-release-macos-x86_64 1.0.15 71.00 145.00 216.00 OK
r-release-windows-x86_64 1.0.15 161.00 165.00 326.00 OK
r-oldrel-macos-arm64 1.0.15 22.00 25.00 47.00 OK
r-oldrel-macos-x86_64 1.0.15 74.00 91.00 165.00 OK
r-oldrel-windows-x86_64 1.0.15 178.00 207.00 385.00 OK

Check Details

Version: 1.0.15
Check: Rd contents
Result: NOTE Rd files without \usage: ‘pagoda2WebApp_arrayToJSON.Rd’ ‘pagoda2WebApp_call.Rd’ ‘pagoda2WebApp_generateDendrogramOfGroups.Rd’ ‘pagoda2WebApp_generateGeneKnnJSON.Rd’ ‘pagoda2WebApp_getCompressedEmbedding.Rd’ ‘pagoda2WebApp_packCompressFloat64Array.Rd’ ‘pagoda2WebApp_packCompressInt32Array.Rd’ ‘pagoda2WebApp_readStaticFile.Rd’ ‘pagoda2WebApp_serializeToStaticFast.Rd’ ‘pagoda2WebApp_serverLog.Rd’ ‘pagoda2WebApp_sparseMatList.Rd’ \arguments should not be documented without \usage. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.0.15
Check: for new files in some other directories
Result: NOTE Found the following files/directories: ‘~/tmp/scratch/Rtmp0BlbLR’ ‘~/tmp/scratch/Rtmp0adxMl’ ‘~/tmp/scratch/Rtmp0azXSP’ ‘~/tmp/scratch/Rtmp0viCo8’ ‘~/tmp/scratch/Rtmp1TjhJQ’ ‘~/tmp/scratch/Rtmp238neM’ ‘~/tmp/scratch/Rtmp2DiTJF’ ‘~/tmp/scratch/Rtmp2QrNNM’ ‘~/tmp/scratch/Rtmp2wiFDF’ ‘~/tmp/scratch/Rtmp3N71PJ’ ‘~/tmp/scratch/Rtmp3YFF0D’ ‘~/tmp/scratch/Rtmp3xX1Wp’ ‘~/tmp/scratch/Rtmp5tTufx’ ‘~/tmp/scratch/Rtmp7CvCmh’ ‘~/tmp/scratch/Rtmp7EuPZv’ ‘~/tmp/scratch/Rtmp7gm7ZV’ ‘~/tmp/scratch/Rtmp7zt55q’ ‘~/tmp/scratch/Rtmp80E8ru’ ‘~/tmp/scratch/Rtmp8JVUeQ’ ‘~/tmp/scratch/Rtmp8YTEUI’ ‘~/tmp/scratch/Rtmp9OVgD0’ ‘~/tmp/scratch/Rtmp9ZgHVJ’ ‘~/tmp/scratch/Rtmp9rtCYH’ ‘~/tmp/scratch/Rtmp9xuECN’ ‘~/tmp/scratch/RtmpAMEdmE’ ‘~/tmp/scratch/RtmpAl5eRJ’ ‘~/tmp/scratch/RtmpBZkTnM’ ‘~/tmp/scratch/RtmpBb5YU1’ ‘~/tmp/scratch/RtmpCTWx5q’ ‘~/tmp/scratch/RtmpDFWuly’ ‘~/tmp/scratch/RtmpDKTHpc’ ‘~/tmp/scratch/RtmpDZcTE2’ ‘~/tmp/scratch/RtmpEvuAsr’ ‘~/tmp/scratch/RtmpFKuwJQ’ ‘~/tmp/scratch/RtmpFVnICj’ ‘~/tmp/scratch/RtmpFWtpIH’ ‘~/tmp/scratch/RtmpG4Xa2K’ ‘~/tmp/scratch/RtmpGOeO7g’ ‘~/tmp/scratch/RtmpGjNpLD’ ‘~/tmp/scratch/RtmpH9uR31’ ‘~/tmp/scratch/RtmpIKvazj’ ‘~/tmp/scratch/RtmpIaDjks’ ‘~/tmp/scratch/RtmpIbKdhC’ ‘~/tmp/scratch/RtmpIwbg0w’ ‘~/tmp/scratch/RtmpJf9l43’ ‘~/tmp/scratch/RtmpJfGpNt’ ‘~/tmp/scratch/RtmpJzKu1e’ ‘~/tmp/scratch/RtmpK0GeIf’ ‘~/tmp/scratch/RtmpKWWn4T’ ‘~/tmp/scratch/RtmpKxAwLj’ ‘~/tmp/scratch/RtmpMwThoG’ ‘~/tmp/scratch/RtmpN2bPPm’ ‘~/tmp/scratch/RtmpNq6gYB’ ‘~/tmp/scratch/RtmpP9Rs88’ ‘~/tmp/scratch/RtmpPHuZKY’ ‘~/tmp/scratch/RtmpPjEFN8’ ‘~/tmp/scratch/RtmpQLro88’ ‘~/tmp/scratch/RtmpQcH0Vd’ ‘~/tmp/scratch/RtmpRBvgey’ ‘~/tmp/scratch/RtmpRJ11iI’ ‘~/tmp/scratch/RtmpRJDebv’ ‘~/tmp/scratch/RtmpRouUjj’ ‘~/tmp/scratch/RtmpSadS7J’ ‘~/tmp/scratch/RtmpSe3ITA’ ‘~/tmp/scratch/RtmpT9E0O3’ ‘~/tmp/scratch/RtmpTDwt27’ ‘~/tmp/scratch/RtmpTO9it6’ ‘~/tmp/scratch/RtmpTnUjCM’ ‘~/tmp/scratch/RtmpToT4vI’ ‘~/tmp/scratch/RtmpUa0HHU’ ‘~/tmp/scratch/RtmpV2XfZg’ ‘~/tmp/scratch/RtmpWHtu1A’ ‘~/tmp/scratch/RtmpWPv60N’ ‘~/tmp/scratch/RtmpWcoIvb’ ‘~/tmp/scratch/RtmpX0sFub’ ‘~/tmp/scratch/RtmpXJ9UmR’ ‘~/tmp/scratch/RtmpYZPUNU’ ‘~/tmp/scratch/RtmpZHMhQP’ ‘~/tmp/scratch/RtmpZoTbDE’ ‘~/tmp/scratch/RtmpaL94Hp’ ‘~/tmp/scratch/RtmpaOTQu9’ ‘~/tmp/scratch/Rtmpalj1XB’ ‘~/tmp/scratch/RtmpbYGcoQ’ ‘~/tmp/scratch/RtmpcEL2Ls’ ‘~/tmp/scratch/Rtmpd2IRr1’ ‘~/tmp/scratch/Rtmpd2fkSR’ ‘~/tmp/scratch/RtmpdDVAMR’ ‘~/tmp/scratch/RtmpdNMGcC’ ‘~/tmp/scratch/RtmpdScrbF’ ‘~/tmp/scratch/Rtmpde4zNy’ ‘~/tmp/scratch/Rtmpeuqmqr’ ‘~/tmp/scratch/RtmpfLE2nx’ ‘~/tmp/scratch/RtmpfntM1x’ ‘~/tmp/scratch/Rtmpfu6V0C’ ‘~/tmp/scratch/Rtmpg2terJ’ ‘~/tmp/scratch/RtmpgCsf0U’ ‘~/tmp/scratch/RtmpgFUvqj’ ‘~/tmp/scratch/RtmphA195U’ ‘~/tmp/scratch/RtmphJkb4a’ ‘~/tmp/scratch/RtmphsY3XK’ ‘~/tmp/scratch/Rtmpi8tPXF’ ‘~/tmp/scratch/RtmpiZ1bPb’ ‘~/tmp/scratch/Rtmpj1bapX’ ‘~/tmp/scratch/Rtmpjayvvq’ ‘~/tmp/scratch/RtmpjoimvL’ ‘~/tmp/scratch/Rtmpjz3IL1’ ‘~/tmp/scratch/Rtmpk2lBie’ ‘~/tmp/scratch/Rtmpk6XPyP’ ‘~/tmp/scratch/RtmpkGuhMc’ ‘~/tmp/scratch/RtmpkxGB8v’ ‘~/tmp/scratch/Rtmpl85DPp’ ‘~/tmp/scratch/RtmpldjJ68’ ‘~/tmp/scratch/RtmpmNSOsJ’ ‘~/tmp/scratch/RtmpmOrN9o’ ‘~/tmp/scratch/RtmpmYd6um’ ‘~/tmp/scratch/Rtmpmkpfyv’ ‘~/tmp/scratch/RtmpnX3OZg’ ‘~/tmp/scratch/RtmpoGG70C’ ‘~/tmp/scratch/RtmpoRe1Ss’ ‘~/tmp/scratch/RtmpoXcFX5’ ‘~/tmp/scratch/RtmpoiAh82’ ‘~/tmp/scratch/RtmppTXlYW’ ‘~/tmp/scratch/RtmppkfQVZ’ ‘~/tmp/scratch/Rtmpprb7zE’ ‘~/tmp/scratch/RtmpqTGFAB’ ‘~/tmp/scratch/RtmpqU9yBG’ ‘~/tmp/scratch/RtmpqzDlXI’ ‘~/tmp/scratch/Rtmpr3Uc7d’ ‘~/tmp/scratch/RtmprFyjza’ ‘~/tmp/scratch/RtmpreelGn’ ‘~/tmp/scratch/RtmpsQ9kv6’ ‘~/tmp/scratch/RtmptlTr6T’ ‘~/tmp/scratch/Rtmpu5qHfV’ ‘~/tmp/scratch/RtmpuDmPSj’ ‘~/tmp/scratch/RtmpuOddc0’ ‘~/tmp/scratch/RtmpuSbI8k’ ‘~/tmp/scratch/RtmpuUhHFv’ ‘~/tmp/scratch/Rtmpv6kFvQ’ ‘~/tmp/scratch/Rtmpv9unA1’ ‘~/tmp/scratch/RtmpvBZtgT’ ‘~/tmp/scratch/RtmpvZLTJ6’ ‘~/tmp/scratch/Rtmpvuh5L5’ ‘~/tmp/scratch/Rtmpw8cYQn’ ‘~/tmp/scratch/RtmpwzSbXf’ ‘~/tmp/scratch/RtmpxUiIGA’ ‘~/tmp/scratch/RtmpxtPAc4’ ‘~/tmp/scratch/RtmpyGfnsi’ ‘~/tmp/scratch/Rtmpz6LFOH’ ‘~/tmp/scratch/RtmpzSYzcy’ ‘~/tmp/scratch/RtmpzThwnP’ ‘~/tmp/scratch/xvfb-run.1mGiWn’ ‘~/tmp/scratch/xvfb-run.42Wdgf’ ‘~/tmp/scratch/xvfb-run.4pabmZ’ ‘~/tmp/scratch/xvfb-run.5woSq8’ ‘~/tmp/scratch/xvfb-run.8oH9Rw’ ‘~/tmp/scratch/xvfb-run.9KennD’ ‘~/tmp/scratch/xvfb-run.AF9GCS’ ‘~/tmp/scratch/xvfb-run.AXu4uE’ ‘~/tmp/scratch/xvfb-run.Apev8g’ ‘~/tmp/scratch/xvfb-run.CLQ2Rd’ ‘~/tmp/scratch/xvfb-run.EBtXGW’ ‘~/tmp/scratch/xvfb-run.EEWPYo’ ‘~/tmp/scratch/xvfb-run.Ffctdo’ ‘~/tmp/scratch/xvfb-run.IKsN7B’ ‘~/tmp/scratch/xvfb-run.InZkgq’ ‘~/tmp/scratch/xvfb-run.JasJ2S’ ‘~/tmp/scratch/xvfb-run.KFtl8h’ ‘~/tmp/scratch/xvfb-run.L1QlRr’ ‘~/tmp/scratch/xvfb-run.LV1bdX’ ‘~/tmp/scratch/xvfb-run.N9h5KL’ ‘~/tmp/scratch/xvfb-run.NfsdIW’ ‘~/tmp/scratch/xvfb-run.OtbCbT’ ‘~/tmp/scratch/xvfb-run.P9q0iG’ ‘~/tmp/scratch/xvfb-run.PgAGO9’ ‘~/tmp/scratch/xvfb-run.SojrUw’ ‘~/tmp/scratch/xvfb-run.Tkd3BV’ ‘~/tmp/scratch/xvfb-run.TpZh8D’ ‘~/tmp/scratch/xvfb-run.U2ti4L’ ‘~/tmp/scratch/xvfb-run.US2p86’ ‘~/tmp/scratch/xvfb-run.VBYW3e’ ‘~/tmp/scratch/xvfb-run.VaS9Lt’ ‘~/tmp/scratch/xvfb-run.WaNNHm’ ‘~/tmp/scratch/xvfb-run.WgI6jM’ ‘~/tmp/scratch/xvfb-run.XOYzuB’ ‘~/tmp/scratch/xvfb-run.aFoI4O’ ‘~/tmp/scratch/xvfb-run.bRl9mV’ ‘~/tmp/scratch/xvfb-run.bZs6vH’ ‘~/tmp/scratch/xvfb-run.bciXxe’ ‘~/tmp/scratch/xvfb-run.beC86V’ ‘~/tmp/scratch/xvfb-run.cP5QOQ’ ‘~/tmp/scratch/xvfb-run.htjFkm’ ‘~/tmp/scratch/xvfb-run.iACNfq’ ‘~/tmp/scratch/xvfb-run.j2D1UM’ ‘~/tmp/scratch/xvfb-run.jURpsX’ ‘~/tmp/scratch/xvfb-run.k31grc’ ‘~/tmp/scratch/xvfb-run.kIovo0’ ‘~/tmp/scratch/xvfb-run.kiRKhg’ ‘~/tmp/scratch/xvfb-run.ksNBZm’ ‘~/tmp/scratch/xvfb-run.lQLZsm’ ‘~/tmp/scratch/xvfb-run.muiu3I’ ‘~/tmp/scratch/xvfb-run.pevomT’ ‘~/tmp/scratch/xvfb-run.pvlodV’ ‘~/tmp/scratch/xvfb-run.pw4YlK’ ‘~/tmp/scratch/xvfb-run.qK5NsU’ ‘~/tmp/scratch/xvfb-run.r91GSe’ ‘~/tmp/scratch/xvfb-run.uJz7Sj’ ‘~/tmp/scratch/xvfb-run.vH4u4b’ ‘~/tmp/scratch/xvfb-run.vK2k9f’ ‘~/tmp/scratch/xvfb-run.vdldvF’ ‘~/tmp/scratch/xvfb-run.wepAyd’ ‘~/tmp/scratch/xvfb-run.wtZOhJ’ ‘~/tmp/scratch/xvfb-run.xe1zSY’ ‘/dev/shm/sm_segment.gimli1.1001.a25a0000.0’ ‘~/.cache/pocl/uncached/tempfile_TgfJTl’ Flavor: r-devel-linux-x86_64-debian-gcc