Useful functions to standardize software outputs from ProteomeDiscoverer, Spectronaut, DIA-NN and MaxQuant on precursor, modified peptide and proteingroup level and to trace software differences for identifications such as varying proteingroup denotations for common precursor.
| Version: | 0.1.1 |
| Depends: | R (≥ 2.10) |
| Imports: | comprehenr, dplyr, ggplot2, magrittr, stringr, tibble, tidyr |
| Suggests: | data.table, kableExtra, knitr, rmarkdown, testthat (≥ 3.0.0) |
| Published: | 2025-04-29 |
| DOI: | 10.32614/CRAN.package.flowTraceR |
| Author: | Oliver Kardell [aut, cre] |
| Maintainer: | Oliver Kardell <Okdll at gmx.net> |
| License: | MIT + file LICENSE |
| URL: | https://github.com/OKdll/flowTraceR |
| NeedsCompilation: | no |
| Materials: | README, NEWS |
| CRAN checks: | flowTraceR results |
| Reference manual: | flowTraceR.html , flowTraceR.pdf |
| Vignettes: |
Example Retention Time Distribution (source, R code) Requirements (source, R code) Workflow (source, R code) |
| Package source: | flowTraceR_0.1.1.tar.gz |
| Windows binaries: | r-devel: flowTraceR_0.1.1.zip, r-release: flowTraceR_0.1.1.zip, r-oldrel: flowTraceR_0.1.1.zip |
| macOS binaries: | r-release (arm64): flowTraceR_0.1.1.tgz, r-oldrel (arm64): flowTraceR_0.1.1.tgz, r-release (x86_64): flowTraceR_0.1.1.tgz, r-oldrel (x86_64): flowTraceR_0.1.1.tgz |
| Old sources: | flowTraceR archive |
| Reverse imports: | mpwR |
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