orthGS: Orthology vs Paralogy Relationships among Glutamine Synthetase from Plants
Tools to analyze and infer orthology and paralogy relationships between glutamine synthetase proteins in seed plants.
| Version: | 0.1.8 |
| Depends: | R (≥ 2.10) |
| Imports: | ape, bio3d, castor, igraph, phangorn, phytools, seqinr, TreeTools |
| Suggests: | BiocManager, Biostrings, fs, knitr, muscle, rmarkdown, testthat |
| Published: | 2025-04-30 |
| DOI: | 10.32614/CRAN.package.orthGS |
| Author: | Elena Aledo [aut, cre, cph],
Juan-Carlos Aledo 
[aut] |
| Maintainer: | Elena Aledo <elenaaledoesteban at gmail.com> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | no |
| Materials: | README, NEWS |
| CRAN checks: | orthGS results |
Documentation:
| Reference manual: | orthGS.html , orthGS.pdf |
| Vignettes: |
Orthology Beyond GS (source, R code) Performing Sequence Alignment in R (source, R code) Searching for GS Orthologs (source, R code) Unraveling the Hiden Paralogs (source, R code) |
Downloads:
| Package source: | orthGS_0.1.8.tar.gz |
| Windows binaries: | r-devel: orthGS_0.1.8.zip, r-release: orthGS_0.1.8.zip, r-oldrel: orthGS_0.1.8.zip |
| macOS binaries: | r-release (arm64): orthGS_0.1.8.tgz, r-oldrel (arm64): orthGS_0.1.8.tgz, r-release (x86_64): orthGS_0.1.8.tgz, r-oldrel (x86_64): orthGS_0.1.8.tgz |
| Old sources: | orthGS archive |
Linking:
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