Last updated on 2026-09-29 12:50:39 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 7.0.3 | 16.68 | 159.17 | 175.85 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 7.0.3 | 11.85 | 121.16 | 133.01 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 8.0 | 88.00 | 563.12 | 651.12 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 8.0 | 99.00 | 562.87 | 661.87 | OK | |
| r-devel-windows-x86_64 | 7.0.3 | 20.00 | 183.00 | 203.00 | OK | |
| r-patched-linux-x86_64 | 7.0.3 | 16.85 | 156.58 | 173.43 | OK | |
| r-release-linux-x86_64 | 7.0.3 | 15.29 | 154.94 | 170.23 | OK | |
| r-release-macos-arm64 | 8.0 | 26.00 | 192.00 | 218.00 | ERROR | |
| r-release-macos-x86_64 | 8.0 | 83.00 | 939.00 | 1022.00 | OK | |
| r-release-windows-x86_64 | 7.0.3 | 23.00 | 192.00 | 215.00 | OK | |
| r-oldrel-macos-arm64 | 8.0 | 32.00 | 218.00 | 250.00 | ERROR | |
| r-oldrel-macos-x86_64 | 8.0 | 83.00 | 882.00 | 965.00 | OK | |
| r-oldrel-windows-x86_64 | 7.0.3 | 26.00 | 240.00 | 266.00 | OK |
Version: 7.0.3
Check: Rd contents
Result: NOTE
Rd files without \usage:
‘Dcriterion.Rd’ ‘adjustGradient.Rd’
‘checkSamplingTimeConstraintsForMetaheuristic.Rd’
‘checkValiditySamplingConstraint.Rd’
‘convertPKModelAnalyticToPKModelODE.Rd’
‘defineModelAdministration.Rd’ ‘defineModelWrapper.Rd’
‘definePKModel.Rd’ ‘definePKPDModel.Rd’ ‘evaluateDesign.Rd’
‘evaluateErrorModelDerivatives.Rd’ ‘evaluateFim.Rd’
‘evaluateInitialConditions.Rd’ ‘evaluateModel.Rd’
‘evaluateModelGradient.Rd’ ‘evaluateModelVariance.Rd’
‘evaluateVarianceFIM.Rd’ ‘finiteDifferenceHessian.Rd’
‘fisherSimplex.Rd’ ‘generateDosesCombination.Rd’
‘generateReportEvaluation.Rd’ ‘generateReportOptimization.Rd’
‘generateSamplingTimesCombination.Rd’
‘generateSamplingsFromSamplingConstraints.Rd’ ‘getModelErrorData.Rd’
‘getModelParametersData.Rd’ ‘plotFrequenciesFedorovWynnAlgorithm.Rd’
‘plotRSEFIM.Rd’ ‘plotSEFIM.Rd’ ‘plotShrinkage.Rd’
‘plotWeightsMultiplicativeAlgorithm.Rd’ ‘setEvaluationFim.Rd’
‘setOptimalArms.Rd’ ‘setSamplingConstraintForOptimization.Rd’
‘showFIM.Rd’ ‘tablesForReport.Rd’
\arguments should not be documented without \usage.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 8.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [45s/45s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(PFIM)
>
> test_check("PFIM")
Saving _problems/test-example-pk-mm-130.R
[ FAIL 1 | WARN 0 | SKIP 49 | PASS 1075 ]
══ Skipped tests (49) ══════════════════════════════════════════════════════════
• On CRAN (42): 'test-eval-opt-references.R:7:7',
'test-eval-opt-references.R:7:7', 'test-fim-pipeline.R:101:3',
'test-gcsf-poped.R:65:3', 'test-joint-mult-iov.R:2:3',
'test-ode-report.R:5:3', 'test-optimization-accessors.R:4:3',
'test-optimization-accessors.R:11:3', 'test-optimization-accessors.R:23:3',
'test-optimization-accessors.R:34:3', 'test-optimization-accessors.R:51:3',
'test-optimization-accessors.R:89:3', 'test-optimization-accessors.R:109:3',
'test-optimization-accessors.R:126:3', 'test-optimization-algorithms.R:4:3',
'test-optimization-algorithms.R:10:3', 'test-optimization-algorithms.R:16:3',
'test-optimization-algorithms.R:22:3', 'test-optimization-algorithms.R:60:3',
'test-optimization-algorithms.R:79:3', 'test-optimization-algorithms.R:89:3',
'test-optimization-algorithms.R:116:3',
'test-optimization-algorithms.R:133:3',
'test-optimization-algorithms.R:145:3',
'test-optimization-algorithms.R:183:3',
'test-optimization-algorithms.R:207:3',
'test-optimization-algorithms.R:235:3',
'test-optimization-algorithms.R:257:3',
'test-optimization-algorithms.R:275:3',
'test-optimization-algorithms.R:313:3',
'test-optimization-algorithms.R:327:3',
'test-optimization-algorithms.R:375:3',
'test-optimization-algorithms.R:382:3',
'test-optimization-metaheuristic.R:25:3',
'test-optimization-metaheuristic.R:32:3',
'test-optimization-metaheuristic.R:42:3',
'test-optimization-metaheuristic.R:52:3',
'test-optimization-metaheuristic.R:74:3',
'test-optimization-metaheuristic.R:95:3', 'test-reports.R:43:3',
'test-reports.R:121:3', 'test-reports.R:137:3'
• R sources unavailable (installed-package check) (2):
'test-pfim-architecture.R:88:3', 'test-pfim-architecture.R:98:3'
• package R/ sources not available (2): 'test-code-style.R:3:3',
'test-cran-review.R:299:3'
• source Rd unavailable in installed-package check (1):
'test-cran-review.R:426:3'
• src/init.c absent (installed tarball) (1): 'test-cpp-kernels.R:27:3'
• tests_PFIM/resultats_de_references not found (1):
'test-eval-opt-references.R:45:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-example-pk-mm.R:130:3'): Model PK 1cpt : MichaelisMenten1BolusSingleDose_VmKm ──
Expected `detPopulationFim` to equal `valueDetPopulationFim`.
Differences:
actual != expected but don't know how to show the difference
[ FAIL 1 | WARN 0 | SKIP 49 | PASS 1075 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-arm64
Version: 8.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [44s/44s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(PFIM)
>
> test_check("PFIM")
Saving _problems/test-example-pk-mm-130.R
[ FAIL 1 | WARN 0 | SKIP 49 | PASS 1075 ]
══ Skipped tests (49) ══════════════════════════════════════════════════════════
• On CRAN (42): 'test-eval-opt-references.R:7:7',
'test-eval-opt-references.R:7:7', 'test-fim-pipeline.R:101:3',
'test-gcsf-poped.R:65:3', 'test-joint-mult-iov.R:2:3',
'test-ode-report.R:5:3', 'test-optimization-accessors.R:4:3',
'test-optimization-accessors.R:11:3', 'test-optimization-accessors.R:23:3',
'test-optimization-accessors.R:34:3', 'test-optimization-accessors.R:51:3',
'test-optimization-accessors.R:89:3', 'test-optimization-accessors.R:109:3',
'test-optimization-accessors.R:126:3', 'test-optimization-algorithms.R:4:3',
'test-optimization-algorithms.R:10:3', 'test-optimization-algorithms.R:16:3',
'test-optimization-algorithms.R:22:3', 'test-optimization-algorithms.R:60:3',
'test-optimization-algorithms.R:79:3', 'test-optimization-algorithms.R:89:3',
'test-optimization-algorithms.R:116:3',
'test-optimization-algorithms.R:133:3',
'test-optimization-algorithms.R:145:3',
'test-optimization-algorithms.R:183:3',
'test-optimization-algorithms.R:207:3',
'test-optimization-algorithms.R:235:3',
'test-optimization-algorithms.R:257:3',
'test-optimization-algorithms.R:275:3',
'test-optimization-algorithms.R:313:3',
'test-optimization-algorithms.R:327:3',
'test-optimization-algorithms.R:375:3',
'test-optimization-algorithms.R:382:3',
'test-optimization-metaheuristic.R:25:3',
'test-optimization-metaheuristic.R:32:3',
'test-optimization-metaheuristic.R:42:3',
'test-optimization-metaheuristic.R:52:3',
'test-optimization-metaheuristic.R:74:3',
'test-optimization-metaheuristic.R:95:3', 'test-reports.R:43:3',
'test-reports.R:121:3', 'test-reports.R:137:3'
• R sources unavailable (installed-package check) (2):
'test-pfim-architecture.R:88:3', 'test-pfim-architecture.R:98:3'
• package R/ sources not available (2): 'test-code-style.R:3:3',
'test-cran-review.R:299:3'
• source Rd unavailable in installed-package check (1):
'test-cran-review.R:426:3'
• src/init.c absent (installed tarball) (1): 'test-cpp-kernels.R:27:3'
• tests_PFIM/resultats_de_references not found (1):
'test-eval-opt-references.R:45:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-example-pk-mm.R:130:3'): Model PK 1cpt : MichaelisMenten1BolusSingleDose_VmKm ──
Expected `detPopulationFim` to equal `valueDetPopulationFim`.
Differences:
actual != expected but don't know how to show the difference
[ FAIL 1 | WARN 0 | SKIP 49 | PASS 1075 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64